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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
2
ChIP-seq
2
pCHi-C
1
total RNA-seq
Assay category
DNA accessibility
2
DNA binding
1
Transcription
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
84
February, 2021
2
March, 2020
2
October, 2019
1
February, 2020
Available data
84
txt
3
tsv
2
bam
2
bed narrowPeak
2
bigWig
Organism
89
Homo sapiens
Biosample type
105
in vitro differentiated cells
89
tissue
73
cell line
39
primary cell
1
stem cell
Organ
84
bone element
3
brain
1
stomach
1
urinary bladder
Project
89
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
89
AMP-T2D consortium
Audit category:
89
inconsistent ontology term
27
inconsistent control
7
audit script error
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
89 results
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RNA microarray
ChIP-seq
pCHi-C
total RNA-seq
tissue
bone element
84
bladder (urinary bladder)
1
brodmann area 43
1
cerebellum (Hemisphere)
1
gastric (mucosa of stomach)
1
insular gyrus
1
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