Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
DNA accessibility
78
DNA binding
Target of assay
49
transcription factor
29
histone
29
histone modification
15
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
64
November, 2017
12
August, 2017
2
October, 2019
Available data
3000
bam
2775
bigWig
1586
tsv
1282
bed narrowPeak
1253
fastq
798
bigBed narrowPeak
396
tagAlign
157
txt
112
bed broadPeak
93
zippedFastqFolder
78
bigBed broadPeak
63
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
78
Homo sapiens
Biosample type
58
cell line
20
primary cell
Organ
58
liver
6
brain
6
epithelium
6
vasculature
4
blood vessel
2
vein
Project
78
AMP
Genome assembly (visualization)
78
hg19
61
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
13
inconsistent control read length
inconsistent assembly
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
12
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
Download