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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
3000
bam
2775
bigWig
1586
tsv
1282
bed narrowPeak
1253
fastq
798
bigBed narrowPeak
396
tagAlign
157
txt
112
bed broadPeak
93
zippedFastqFolder
78
bigBed broadPeak
63
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
inconsistent assembly
assay_slims!
DNA accessibility
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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