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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
Available data
226
bam
225
fastq
202
bigWig
121
tsv
84
bed narrowPeak
41
zippedFastqFolder
36
bigBed narrowPeak
7
tagAlign
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
5
bed bed3+
5
hic
4
bedpe bed3+
3
cool
2
hdf5
Organism
4
Homo sapiens
Biosample type
4
primary cell
cell line
Organ
6
pancreas
4
epithelium
3
heart
2
blood vessel
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
liver
1
vein
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
assay_slims!
DNA accessibility
biosample_type!
cell line
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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