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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
467
total RNA-seq
84
RNA microarray
18
single cell RNA-seq
6
WGBS
3
snDrop-seq
1
pCHi-C
Assay category
485
Transcription
DNA accessibility
6
DNA methylation
Date released
579
February, 2021
400
August, 2017
360
May, 2021
253
October, 2019
240
May, 2020
193
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
July, 2019
94
December, 2017
94
February, 2023
91
November, 2017
80
April, 2019
76
October, 2018
59
September, 2018
56
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
31
June, 2019
25
February, 2020
20
November, 2019
17
November, 2018
15
October, 2017
10
December, 2019
9
April, 2020
8
November, 2020
7
December, 2018
7
January, 2019
6
September, 2017
5
January, 2018
4
August, 2018
4
May, 2023
3
June, 2018
3
March, 2023
3
October, 2022
1
March, 2019
Available data
481
tsv
468
bam
467
bigWig
89
txt
18
fastq
6
csv
1
bed bed3+
Organism
579
Homo sapiens
Biosample type
537
tissue
cell line
22
in vitro differentiated cells
20
primary cell
Organ
450
connective tissue
386
adipose tissue
142
bone element
8
kidney
6
epithelium
6
pancreas
1
liver
Project
561
AMP
18
HPAP
Genome assembly (visualization)
468
hg19
467
GRCh38
Lab
561
AMP-T2D consortium
18
Klaus Kaestner, Upenn
Audit category:
102
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
biosample_type!
cell line
BIOSAMPLE
ASSAY
579 results
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Clear Filters
total RNA-seq
RNA microarray
single cell RNA-seq
WGBS
snDrop-seq
pCHi-C
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 5 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
Langerhans cell
12
pancreatic alpha cell
6
osteoblast
1
1
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