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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
66
DNA binding
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
63
October, 2019
7
May, 2019
5
July, 2019
3
February, 2020
Available data
70
bam
53
bigWig
48
bed narrowPeak
48
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
78
Homo sapiens
Biosample type
78
tissue
Organ
751
liver
619
connective tissue
498
pancreas
481
adipose tissue
266
heart
233
brain
167
kidney
148
blood vessel
148
vasculature
146
bone element
90
artery
86
epithelium
78
limb
60
blood
60
bodily fluid
48
musculature of body
40
nerve
37
embryo
25
eye
23
spleen
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
78
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
78
AMP-T2D consortium
assay_slims!
DNA accessibility
biosample_type!
primary cell
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
35
5
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
1
4
islet of Langerhans
1
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