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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
15
total RNA-seq
Assay category
30
DNA binding
15
Transcription
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
277
November, 2017
260
May, 2021
106
February, 2021
88
August, 2017
58
September, 2018
57
November, 2018
48
July, 2018
45
August, 2021
45
May, 2020
43
April, 2018
40
October, 2019
36
December, 2017
31
February, 2018
27
December, 2018
23
June, 2019
22
July, 2019
20
January, 2019
12
November, 2019
7
March, 2020
5
December, 2019
5
January, 2018
4
May, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
45
bigWig
39
bam
30
bed narrowPeak
24
tagAlign
24
tsv
5
bed bed3+
1
bedpe bed3+
1
hic
1
vcf
Organism
45
Homo sapiens
Biosample type
22
cell line
20
in vitro differentiated cells
3
primary cell
Organ
17
liver
8
embryo
3
epithelium
Project
45
AMP
Genome assembly (visualization)
44
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
14
Bing Ren, UCSD
assay_slims!
DNA accessibility
biosample_type!
tissue
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
primary cell
hepatocyte
3
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