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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
12
single cell RNA-seq
8
ChIP-seq
6
WGBS
1
pCHi-C
Assay category
108
Transcription
DNA accessibility
8
DNA binding
6
DNA methylation
Target of assay
5
transcription factor
3
control
Date released
324
November, 2017
323
May, 2021
123
February, 2021
82
February, 2023
76
August, 2021
74
May, 2022
62
November, 2018
59
October, 2019
59
September, 2018
56
September, 2020
54
August, 2017
48
May, 2020
46
December, 2017
46
July, 2018
41
April, 2018
39
February, 2018
28
December, 2018
23
January, 2019
23
July, 2019
21
March, 2020
19
June, 2019
15
November, 2019
7
December, 2019
6
November, 2020
5
January, 2018
5
March, 2023
5
May, 2019
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
Available data
104
bam
102
tsv
101
bigWig
18
fastq
8
tagAlign
5
bed narrowPeak
1
bed bed3+
Organism
123
Homo sapiens
Biosample type
tissue
87
cell line
18
in vitro differentiated cells
18
primary cell
Organ
58
artery
58
blood vessel
58
heart
58
vasculature
32
epithelium
32
pancreas
connective tissue
1
liver
Project
105
AMP
18
HPAP
Genome assembly (visualization)
102
hg19
101
GRCh38
Lab
105
AMP-T2D consortium
18
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
assay_slims!
DNA accessibility
biosample_type!
tissue
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
123 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
WGBS
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
6
EndoC_BH1
26
iPSC derived cell line
2
HepG2
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
primary cell
Langerhans cell
12
pancreatic alpha cell
6
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