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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
Assay category
176
DNA binding
89
Transcription
14
DNA methylation
DNA accessibility
Target of assay
124
histone modification
123
histone
73
broad histone mark
50
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
537
February, 2021
279
August, 2017
222
October, 2019
193
May, 2020
159
August, 2021
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2018
15
October, 2017
14
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
Available data
174
bigWig
171
fastq
166
bam
89
tsv
62
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
18
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
272
Homo sapiens
Biosample type
279
tissue
67
in vitro differentiated cells
54
primary cell
Organ
145
pancreas
56
adipose tissue
56
connective tissue
52
liver
26
musculature of body
Project
279
AMP
Genome assembly (visualization)
176
hg19
155
GRCh38
Lab
279
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
279 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
tissue
islet of Langerhans
42
89
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
14
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