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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
277
ChIP-seq
22
total RNA-seq
4
pCHi-C
1
Hi-C
Assay category
277
DNA binding
22
Transcription
DNA accessibility
1
3D chromatin structure
Target of assay
238
histone
238
histone modification
157
narrow histone mark
81
broad histone mark
39
control
Date released
537
February, 2021
279
August, 2017
222
October, 2019
193
May, 2020
159
August, 2021
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
69
July, 2019
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
38
March, 2020
27
May, 2022
25
February, 2020
20
November, 2019
16
November, 2018
15
October, 2017
14
February, 2023
9
April, 2020
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
May, 2023
4
November, 2020
3
December, 2019
1
March, 2019
Available data
249
bam
210
bigWig
203
bed narrowPeak
115
tagAlign
99
bigBed narrowPeak
8
tsv
6
bed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
304
Homo sapiens
Biosample type
343
cell line
304
tissue
36
primary cell
4
in vitro differentiated cells
Organ
167
brain
63
limb
39
nerve
23
artery
23
blood vessel
23
vasculature
20
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
1
connective tissue
1
lymph node
1
pituitary gland
Project
304
AMP
Genome assembly (visualization)
212
GRCh38
162
hg19
Lab
304
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
304 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
4
tibial nerve
35
4
layer of hippocampus
23
tibial artery
23
substantia nigra
16
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