Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
14
total RNA-seq
5
Hi-C
4
pCHi-C
Assay category
23
DNA binding
DNA accessibility
14
Transcription
5
3D chromatin structure
Target of assay
23
histone
23
histone modification
23
narrow histone mark
Date released
198
August, 2021
128
August, 2017
112
February, 2021
101
May, 2021
100
February, 2023
95
May, 2022
56
September, 2020
47
September, 2023
46
October, 2019
44
March, 2020
26
July, 2019
25
February, 2020
14
November, 2017
10
November, 2020
9
April, 2020
7
October, 2017
5
December, 2019
5
January, 2018
5
March, 2023
4
July, 2018
4
May, 2023
4
October, 2022
3
May, 2020
2
November, 2019
1
April, 2019
1
August, 2018
1
December, 2018
1
March, 2019
1
November, 2018
1
September, 2018
Available data
bam
193
bigWig
174
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
16
tsv
4
hic
3
bedpe bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
1
hdf5
1
tagAlign bed3+
Organism
46
Homo sapiens
Biosample type
42
tissue
2
in vitro differentiated cells
1
cell line
1
primary cell
Organ
20
eye
4
gonad
4
ovary
2
brain
1
blood vessel
1
connective tissue
1
epithelium
1
heart
1
limb
1
lymph node
1
pancreas
1
vasculature
1
vein
Project
46
AMP
Genome assembly (visualization)
7
hg19
3
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
Audit category:
1
inconsistent assembly
assay_slims!
DNA accessibility
files.file_type!
bam
BIOSAMPLE
ASSAY
46 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
21
14
4
dorsal plus ventral thalamus
1
heart
1
planum polare
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
primary cell
endothelial cell of umbilical vein
1
Download