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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
9
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
9
DNA binding
Target of assay
9
control
Date released
54
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
May, 2019
Available data
88
bam
79
bigWig
58
tsv
bed narrowPeak
21
bigBed narrowPeak
6
tagAlign
Organism
67
Homo sapiens
Biosample type
54
cell line
11
tissue
2
primary cell
Organ
633
pancreas
592
connective tissue
476
adipose tissue
349
liver
304
epithelium
202
heart
152
kidney
147
bone element
103
vasculature
101
blood vessel
79
brain
67
artery
34
musculature of body
30
limb
27
eye
23
embryo
16
nerve
11
spleen
10
lung
9
vein
6
blood
6
bodily fluid
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
67
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
5
coronary artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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