Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
120
ChIP-seq
Assay category
127
Transcription
120
DNA binding
DNA accessibility
Target of assay
78
histone
78
histone modification
40
narrow histone mark
37
broad histone mark
37
transcription factor
6
RNA binding protein
5
control
3
chromatin remodeller
Date released
84
May, 2021
48
August, 2017
38
December, 2017
31
February, 2018
22
February, 2021
20
August, 2021
2
March, 2020
2
October, 2019
Available data
247
bam
242
bigWig
127
tsv
117
fastq
110
bed narrowPeak
19
bed bed3+
18
tagAlign
14
bigBed narrowPeak
Organism
247
Homo sapiens
Biosample type
1524
tissue
459
primary cell
452
cell line
247
in vitro differentiated cells
3
stem cell
Organ
53
connective tissue
21
embryo
20
epithelium
14
liver
2
pancreas
1
heart
Project
247
AMP
Genome assembly (visualization)
250
hg19
247
GRCh38
4
hg18
Lab
247
AMP-T2D consortium
Audit category:
92
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
17
inconsistent control read length
assay_slims!
DNA accessibility
files.file_type!
hic
BIOSAMPLE
ASSAY
247 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
adipocyte
4
48
neural progenitor cell
7
13
cardiac precursors (cardiac muscle cell)
19
pancreatic endoderm
4
13
+ See 23 more…
See all biosamples
Download