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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
DNA accessibility
90
Transcription
Date released
406
November, 2017
363
May, 2021
277
August, 2017
276
October, 2019
241
May, 2020
232
August, 2021
216
February, 2021
166
July, 2018
120
May, 2019
101
May, 2022
96
February, 2023
94
December, 2017
82
July, 2019
80
April, 2019
78
November, 2018
59
September, 2018
56
September, 2020
53
October, 2018
48
March, 2020
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
33
November, 2019
30
January, 2019
23
February, 2020
19
June, 2019
15
October, 2017
10
December, 2019
10
November, 2020
9
April, 2020
6
September, 2017
5
January, 2018
4
March, 2023
3
August, 2018
3
June, 2018
3
May, 2023
1
October, 2022
Available data
76
fastq
4
tsv
4
txt
Organism
95
Homo sapiens
Biosample type
76
primary cell
14
tissue
6
cell line
Organ
43
pancreas
40
epithelium
4
bone element
connective tissue
4
eye
4
skeleton
1
heart
Project
76
HPAP
10
AMP
10
T1D
Lab
76
Klaus Kaestner, Upenn
10
AMP-T2D consortium
10
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
files.file_type!
hic
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
96 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
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