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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
2
pCHi-C
Assay category
60
DNA binding
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
March, 2020
1
May, 2021
Available data
60
bam
60
fastq
54
bed narrowPeak
54
bigBed narrowPeak
54
bigWig
1
tsv
Organism
62
Homo sapiens
Biosample type
60
cell line
2
tissue
Organ
766
pancreas
760
liver
650
connective tissue
483
adipose tissue
395
epithelium
313
heart
249
brain
190
kidney
175
vasculature
171
blood vessel
bone element
92
artery
78
limb
60
blood
60
bodily fluid
59
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
17
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
61
AMP
1
T1D
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
61
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_slims!
DNA accessibility
files.file_type!
hic
organ_slims!
bone element
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
pCHi-C
cell line
GM12878
60
tissue
thymus
2
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