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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
Assay category
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
4
November, 2017
2
October, 2019
Available data
275
bam
249
bigWig
225
fastq
155
tsv
97
bed narrowPeak
41
zippedFastqFolder
36
bigBed narrowPeak
7
tagAlign
6
bed bedMethyl
6
bed broadPeak
6
bigBed bedMethyl
6
bigBed broadPeak
6
hic
5
bed bed3+
5
bedpe bed3+
3
cool
2
hdf5
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
58
liver
15
brain
13
musculature of body
12
pancreas
6
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
vcf
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
primary cell
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
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