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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
16
WGBS
Assay category
33
DNA methylation
Date released
22
July, 2019
6
November, 2018
5
August, 2017
Available data
2330
bam
2183
bigWig
1412
tsv
872
bed narrowPeak
795
fastq
449
bigBed narrowPeak
312
tagAlign
157
txt
93
zippedFastqFolder
56
bed bed3+
56
bed broadPeak
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
bigBed broadPeak
21
hic
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
33
Homo sapiens
Biosample type
24
tissue
9
primary cell
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
liver
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 4 more…
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