Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
33
single cell RNA-seq
6
WGBS
3
Hi-C
Assay category
125
Transcription
DNA accessibility
6
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
37
September, 2020
18
February, 2021
3
October, 2022
Available data
132
fastq
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
134
Homo sapiens
Biosample type
134
primary cell
Organ
62
epithelium
62
pancreas
Project
3559
AMP
215
T1D
134
HPAP
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
134
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_slims!
DNA accessibility
lab.title!
Bing Ren, UCSD
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
134 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
42
6
1
exocrine cell
39
Langerhans cell
33
pancreatic beta cell
11
1
pancreatic acinar cell
1
Download