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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
47
WGBS
45
single cell RNA-seq
3
Hi-C
Assay category
121
Transcription
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
76
February, 2023
74
May, 2022
September, 2020
18
February, 2021
3
October, 2022
Available data
94
fastq
74
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
171
Homo sapiens
Biosample type
171
primary cell
Organ
87
epithelium
87
pancreas
Project
3559
AMP
215
T1D
171
HPAP
47
KPMP
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
171
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_slims!
DNA accessibility
lab.title!
Bing Ren, UCSD
month_released!
September, 2020
BIOSAMPLE
ASSAY
171 results
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total RNA-seq
WGBS
single cell RNA-seq
Hi-C
primary cell
pancreatic alpha cell
27
31
1
Langerhans cell
45
exocrine cell
39
pancreatic beta cell
10
16
1
pancreatic acinar cell
1
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