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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
10
total RNA-seq
5
single cell RNA-seq
1
MPRA
Assay category
15
Transcription
DNA accessibility
Date released
89
February, 2021
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2964
bam
2734
bigWig
1463
tsv
1256
fastq
1255
bed narrowPeak
801
bigBed narrowPeak
374
tagAlign
114
bed broadPeak
100
txt
93
zippedFastqFolder
79
bigBed broadPeak
59
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
99
Homo sapiens
Biosample type
99
tissue
1
cell line
Organ
88
bone element
6
pancreas
5
kidney
4
skeleton
Project
100
AMP
Lab
94
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
month_released!
August, 2021
BIOSAMPLE
ASSAY
100 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
islet of Langerhans
6
kidney
5
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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