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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
211
ChIP-seq
Assay category
211
DNA binding
89
Transcription
15
DNA methylation
DNA accessibility
Target of assay
125
histone modification
124
histone
64
broad histone mark
59
narrow histone mark
47
transcription factor
39
control
8
RNA binding protein
3
chromatin remodeller
Date released
328
November, 2017
211
August, 2017
193
October, 2019
120
May, 2019
94
December, 2017
80
April, 2019
75
May, 2021
74
October, 2018
70
November, 2018
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
19
August, 2021
13
November, 2019
6
September, 2017
3
March, 2020
1
October, 2017
Available data
181
bam
181
fastq
171
bigWig
132
bed narrowPeak
tagAlign
39
bed broadPeak
33
bed bed3+
32
bigBed narrowPeak
13
bigBed broadPeak
Organism
211
Homo sapiens
Biosample type
117
tissue
53
in vitro differentiated cells
41
primary cell
Organ
95
connective tissue
78
pancreas
42
adipose tissue
28
liver
26
epithelium
7
musculature of body
Project
211
AMP
Genome assembly (visualization)
135
hg19
134
GRCh38
Lab
211
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
assay_slims!
DNA accessibility
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
211 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
33
liver
28
subcutaneous abdominal adipose tissue
28
white adipose tissue
12
pancreas
7
+ See 2 more…
in vitro differentiated cells
adipocyte
53
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
3
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