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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
179
ChIP-seq
6
RRBS
3
WGBS
Assay category
179
DNA binding
DNA accessibility
9
DNA methylation
Target of assay
130
histone modification
129
histone
69
broad histone mark
60
narrow histone mark
36
control
13
transcription factor
4
RNA binding protein
1
chromatin remodeller
Date released
406
November, 2017
264
October, 2019
191
May, 2021
188
August, 2017
120
May, 2019
111
August, 2021
106
February, 2021
101
May, 2022
94
December, 2017
92
February, 2023
80
April, 2019
78
November, 2018
56
September, 2020
52
May, 2020
51
October, 2018
47
September, 2023
40
May, 2024
35
December, 2018
33
July, 2019
33
September, 2018
25
January, 2019
24
February, 2018
19
June, 2019
17
March, 2020
15
November, 2019
15
October, 2017
10
November, 2020
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
July, 2018
4
October, 2022
3
May, 2023
1
December, 2019
1
March, 2019
Available data
208
fastq
203
bam
199
bigWig
tsv
88
bed narrowPeak
63
tagAlign
38
bed broadPeak
31
bigBed narrowPeak
22
bed bed3+
13
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
Organism
181
Homo sapiens
Biosample type
134
tissue
54
primary cell
Organ
connective tissue
94
pancreas
56
adipose tissue
52
liver
26
epithelium
26
musculature of body
Project
188
AMP
Genome assembly (visualization)
115
hg19
90
GRCh38
Lab
188
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_slims!
DNA accessibility
files.file_type!
tsv
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
188 results
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Clear Filters
ChIP-seq
RRBS
WGBS
tissue
liver
48
1
3
islet of Langerhans
42
skeletal muscle tissue
22
4
pancreas
14
primary cell
skeletal muscle myoblast
15
1
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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