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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
181
ChIP-seq
89
total RNA-seq
2
WGBS
Assay category
181
DNA binding
89
Transcription
DNA accessibility
2
DNA methylation
Target of assay
103
histone modification
102
histone
52
narrow histone mark
49
broad histone mark
47
transcription factor
31
control
8
RNA binding protein
3
chromatin remodeller
Date released
554
February, 2021
November, 2017
272
August, 2017
264
May, 2021
238
May, 2020
235
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
79
April, 2019
77
November, 2018
76
October, 2018
74
July, 2019
58
September, 2018
49
April, 2018
39
August, 2021
39
February, 2018
34
December, 2018
33
November, 2019
31
June, 2019
30
January, 2019
16
March, 2020
8
October, 2017
6
May, 2022
6
September, 2017
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
Available data
278
fastq
272
bam
262
bigWig
132
bed narrowPeak
89
tsv
85
tagAlign
39
bed broadPeak
33
bed bed3+
32
bigBed narrowPeak
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
265
Homo sapiens
Biosample type
166
tissue
53
in vitro differentiated cells
53
primary cell
Organ
163
pancreas
69
connective tissue
26
epithelium
25
liver
16
adipose tissue
Project
272
AMP
Genome assembly (visualization)
242
GRCh38
242
hg19
Lab
272
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_slims!
DNA accessibility
month_released!
November, 2017
BIOSAMPLE
ASSAY
272 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
tissue
islet of Langerhans
22
89
liver
25
pancreas
14
white adipose tissue
12
adipose tissue
2
2
in vitro differentiated cells
adipocyte
53
primary cell
skeletal muscle myoblast
15
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
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