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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
ChIP-seq
Assay category
109
DNA binding
DNA accessibility
Target of assay
43
histone
43
histone modification
42
transcription factor
25
broad histone mark
24
control
18
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
103
fastq
102
bam
78
bed narrowPeak
78
bigWig
56
bigBed narrowPeak
15
bed bed3+
14
tagAlign
3
bed broadPeak
Organism
109
Homo sapiens
Biosample type
63
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
19
epithelium
15
brain
13
embryo
Project
109
AMP
Genome assembly (visualization)
83
GRCh38
83
hg19
Lab
109
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
11
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
tissue
liver
38
brain
15
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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stem cell
hESC
3
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