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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
20
total RNA-seq
3
Hi-C
Assay category
47
DNA binding
DNA accessibility
20
Transcription
3
3D chromatin structure
Target of assay
29
transcription factor
10
histone
10
histone modification
6
broad histone mark
6
control
4
narrow histone mark
3
RNA binding protein
2
chromatin remodeller
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
67
bam
61
bigWig
41
bed narrowPeak
35
fastq
30
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
70
Homo sapiens
Biosample type
43
cell line
27
tissue
Organ
35
pancreas
27
blood
27
bodily fluid
15
epithelium
7
spleen
1
liver
Project
70
AMP
Genome assembly (visualization)
63
hg19
61
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
1
inconsistent control
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
cell line
GM12878
27
EndoC_BH1
13
1
1
HepG2
1
tissue
islet of Langerhans
19
1
spleen
7
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