Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
544
total RNA-seq
84
RNA microarray
8
ChIP-seq
6
single cell RNA-seq
3
snDrop-seq
1
pCHi-C
Assay category
550
Transcription
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
646
February, 2021
397
November, 2017
346
August, 2017
254
October, 2019
233
August, 2021
194
May, 2020
172
May, 2021
120
July, 2018
115
May, 2019
94
December, 2017
80
April, 2019
77
November, 2018
74
October, 2018
69
July, 2019
59
March, 2020
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
27
May, 2022
25
February, 2020
24
February, 2023
15
October, 2017
10
November, 2020
9
April, 2020
6
April, 2018
6
September, 2017
5
December, 2019
5
January, 2018
4
March, 2023
4
May, 2023
1
August, 2018
1
March, 2019
1
October, 2022
Available data
552
bam
552
tsv
549
bigWig
89
txt
8
tagAlign
6
csv
5
bed narrowPeak
1
bed bed3+
Organism
646
Homo sapiens
Biosample type
537
tissue
87
cell line
22
in vitro differentiated cells
primary cell
Organ
448
connective tissue
386
adipose tissue
142
bone element
58
artery
58
blood vessel
58
heart
58
vasculature
26
epithelium
26
pancreas
8
kidney
2
liver
Project
646
AMP
Genome assembly (visualization)
550
hg19
549
GRCh38
Lab
646
AMP-T2D consortium
Audit category:
128
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
biosample_type!
primary cell
BIOSAMPLE
ASSAY
646 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
RNA microarray
ChIP-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
52
6
EndoC_BH1
26
iPSC derived cell line
2
HepG2
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
See all biosamples
Download