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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
49
single cell RNA-seq
32
ChIP-seq
Assay category
195
Transcription
32
DNA binding
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
222
bam
222
bigWig
190
tsv
109
fastq
32
bed narrowPeak
1
csv
Organism
227
Homo sapiens
Biosample type
120
tissue
107
primary cell
Organ
215
pancreas
80
epithelium
2
connective tissue
Project
227
AMP
Genome assembly (visualization)
222
GRCh38
222
hg19
Lab
227
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
32
missing controlled_by
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
227 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
primary cell
pancreatic ductal cell
4
3
13
pancreatic beta cell
10
9
pancreatic alpha cell
10
7
pancreatic acinar cell
2
5
8
pancreatic endocrine cell
11
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