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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
total RNA-seq
51
single cell RNA-seq
18
small RNA-seq
8
Hi-C
Assay category
233
Transcription
DNA methylation
8
3D chromatin structure
DNA accessibility
Target of assay
3
control
Date released
660
February, 2021
406
November, 2017
385
August, 2017
364
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
100
February, 2023
94
December, 2017
80
April, 2019
76
October, 2018
73
July, 2019
71
November, 2018
60
March, 2020
60
May, 2022
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
233
bigWig
229
bam
229
tsv
50
fastq
4
bed bed3+
4
hdf5
Organism
241
Homo sapiens
Biosample type
171
tissue
70
primary cell
Organ
161
pancreas
40
epithelium
19
connective tissue
14
brain
12
adipose tissue
11
heart
8
liver
8
musculature of body
7
blood vessel
7
vasculature
6
kidney
4
limb
2
artery
1
pericardium
Project
241
AMP
Genome assembly (visualization)
233
hg19
229
GRCh38
Lab
241
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_slims!
DNA accessibility
DNA methylation
BIOSAMPLE
ASSAY
241 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
Hi-C
tissue
islet of Langerhans
120
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
gastrocnemius medialis
4
+ See 16 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 29 more…
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