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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
55
total RNA-seq
16
pCHi-C
1
DNAme array
1
Hi-C
Assay category
121
DNA binding
55
Transcription
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
193
May, 2021
76
February, 2023
74
May, 2022
59
September, 2018
56
September, 2020
54
August, 2017
48
July, 2018
47
May, 2020
43
April, 2018
31
July, 2019
31
June, 2019
27
October, 2019
20
February, 2021
9
November, 2017
5
December, 2019
5
May, 2019
4
August, 2021
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
136
bam
114
bed narrowPeak
84
tagAlign
52
tsv
2
bed bed3+
1
bedpe bed3+
1
hic
Organism
194
Homo sapiens
Biosample type
194
primary cell
135
in vitro differentiated cells
78
tissue
14
cell line
4
stem cell
Organ
1
blood vessel
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
vasculature
1
vein
Project
151
T1D
43
AMP
Genome assembly (visualization)
172
hg19
136
GRCh38
Lab
186
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
194 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
DNAme array
Hi-C
primary cell
monocyte
85
52
1
1
CD8-positive, alpha-beta T cell
33
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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