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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
56
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
DNA accessibility
56
DNA binding
Target of assay
29
control
27
histone
27
histone modification
27
narrow histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
244
bam
215
bigWig
189
tsv
50
tagAlign
27
bed narrowPeak
6
fastq
2
bed bed3+
Organism
247
Homo sapiens
Biosample type
199
tissue
47
primary cell
1
cell line
Organ
194
liver
6
pancreas
Project
202
AMP
45
T1D
Genome assembly (visualization)
217
hg19
209
GRCh38
Lab
202
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
247 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
tissue
liver
143
50
islet of Langerhans
6
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
cell line
HepG2
1
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