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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
Assay category
DNA accessibility
80
DNA binding
60
Transcription
41
DNA methylation
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
85
bam
74
zippedFastqFolder
65
bed narrowPeak
65
bigWig
64
bigBed narrowPeak
6
fastq
6
txt
Organism
181
Homo sapiens
Biosample type
107
tissue
74
primary cell
Organ
57
heart
47
pancreas
41
epithelium
23
kidney
20
liver
1
musculature of body
Project
107
AMP
74
HPAP
Genome assembly (visualization)
65
hg19
64
GRCh38
Lab
81
AMP-T2D consortium
74
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
181 results
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Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
total RNA-seq
tissue
heart left ventricle
35
kidney
23
liver
20
heart right ventricle
13
heart
9
+ See 2 more…
primary cell
Langerhans cell
33
pancreatic alpha cell
25
pancreatic beta cell
16
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