Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
34
single cell RNA-seq
31
total RNA-seq
4
ChIP-seq
Assay category
DNA accessibility
65
Transcription
41
DNA methylation
4
DNA binding
Target of assay
4
control
Date released
666
February, 2021
368
August, 2017
365
May, 2021
241
May, 2020
237
August, 2021
223
October, 2019
168
July, 2018
101
May, 2022
100
February, 2023
100
July, 2019
94
November, 2017
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
35
November, 2019
31
October, 2018
25
February, 2020
23
May, 2019
16
April, 2019
15
November, 2018
14
November, 2020
10
December, 2019
9
April, 2020
9
January, 2019
9
October, 2017
8
June, 2019
6
September, 2017
5
December, 2018
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
74
zippedFastqFolder
36
bam
36
fastq
26
bigWig
21
bed narrowPeak
bigBed narrowPeak
6
txt
5
tsv
Organism
110
Homo sapiens
Biosample type
74
primary cell
28
tissue
8
cell line
Organ
47
pancreas
41
epithelium
25
liver
3
blood
3
bodily fluid
1
musculature of body
1
spleen
Project
74
HPAP
36
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
74
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
10
AMP-T2D consortium
6
Kyle Gaulton, UCSD
assay_slims!
DNA accessibility
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
110 results
search-icon
table-tab-icon
Clear Filters
WGBS
single cell RNA-seq
total RNA-seq
ChIP-seq
primary cell
Langerhans cell
33
pancreatic alpha cell
25
pancreatic beta cell
16
tissue
liver
20
islet of Langerhans
6
skeletal muscle tissue
1
spleen
1
cell line
HepG2
5
GM12878
3
Download