Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
82
single cell RNA-seq
41
WGBS
Assay category
228
Transcription
DNA accessibility
41
DNA methylation
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
170
bam
164
bigWig
164
tsv
74
zippedFastqFolder
56
fastq
6
txt
Organism
269
Homo sapiens
Biosample type
147
tissue
122
primary cell
Organ
204
pancreas
74
epithelium
20
liver
2
connective tissue
1
musculature of body
Project
195
AMP
74
HPAP
Genome assembly (visualization)
164
GRCh38
164
hg19
Lab
169
AMP-T2D consortium
74
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
269 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
tissue
islet of Langerhans
126
liver
20
skeletal muscle tissue
1
primary cell
Langerhans cell
33
pancreatic alpha cell
7
25
pancreatic beta cell
9
16
pancreatic acinar cell
5
pancreatic delta cell
4
+ See 11 more…
See all biosamples
Download