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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
15
total RNA-seq
Assay category
39
DNA binding
15
Transcription
DNA accessibility
Target of assay
28
histone
28
histone modification
18
broad histone mark
11
control
10
narrow histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
48
fastq
47
bam
37
bigWig
22
bed narrowPeak
15
tsv
14
tagAlign
6
bigBed narrowPeak
3
bed broadPeak
Organism
54
Homo sapiens
Biosample type
39
in vitro differentiated cells
15
tissue
Organ
15
brain
13
embryo
Project
54
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
54
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
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tissue
brain
15
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