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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
single cell RNA-seq
1
MPRA
Assay category
59
Transcription
DNA accessibility
Date released
84
February, 2021
49
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2903
bam
2719
bigWig
1380
tsv
1325
bed narrowPeak
1128
fastq
801
bigBed narrowPeak
398
tagAlign
144
txt
114
bed broadPeak
79
bigBed broadPeak
64
bed bed3+
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
143
Homo sapiens
Biosample type
143
tissue
1
cell line
Organ
88
bone element
49
kidney
6
pancreas
4
skeleton
Project
144
AMP
Lab
89
AMP-T2D consortium
49
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
large intestine
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
144 results
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RNA microarray
total RNA-seq
MPRA
tissue
bone element
84
kidney
49
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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cell line
MIN6
1
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