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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
94
Transcription
DNA accessibility
Date released
607
February, 2021
356
May, 2021
350
August, 2017
331
November, 2017
219
August, 2021
218
May, 2020
208
October, 2019
168
July, 2018
101
May, 2022
100
February, 2023
87
July, 2019
73
December, 2017
72
November, 2018
66
April, 2019
59
September, 2018
58
May, 2019
56
March, 2020
56
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
33
November, 2019
31
December, 2018
31
February, 2018
26
January, 2019
23
June, 2019
22
February, 2020
12
October, 2017
10
December, 2019
9
April, 2020
9
November, 2020
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
76
fastq
4
tsv
4
txt
Organism
99
Homo sapiens
Biosample type
76
primary cell
14
tissue
6
cell line
4
in vitro differentiated cells
Organ
43
pancreas
40
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
1
heart
Project
76
HPAP
14
AMP
10
T1D
Lab
76
Klaus Kaestner, Upenn
14
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
organ_slims!
vasculature
target.investigated_as!
control
BIOSAMPLE
ASSAY
100 results
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Clear Filters
total RNA-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
heart
1
+ See 3 more…
cell line
EndoC_BH1
3
2
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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