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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
34
ChIP-seq
single cell RNA-seq
Assay category
56
Transcription
DNA accessibility
34
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
23
October, 2019
5
May, 2019
2
February, 2020
2
July, 2019
Available data
88
bam
79
bigWig
56
tsv
25
bed narrowPeak
21
bigBed narrowPeak
6
tagAlign
Organism
90
Homo sapiens
Biosample type
58
cell line
30
tissue
2
primary cell
Organ
761
liver
699
pancreas
646
connective tissue
483
adipose tissue
331
epithelium
246
brain
183
heart
172
vasculature
168
blood vessel
147
bone element
127
kidney
90
artery
78
limb
60
blood
60
bodily fluid
60
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
19
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
90
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
90
AMP-T2D consortium
assay_slims!
DNA accessibility
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
90 results
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total RNA-seq
ChIP-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
coronary artery
1
5
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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