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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
28
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
52
February, 2021
23
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
88
bam
79
bigWig
58
tsv
25
bed narrowPeak
21
bigBed narrowPeak
tagAlign
Organism
86
Homo sapiens
Biosample type
52
cell line
32
tissue
2
primary cell
Organ
754
pancreas
676
liver
628
connective tissue
475
adipose tissue
394
epithelium
270
heart
191
kidney
172
vasculature
168
blood vessel
147
bone element
131
brain
86
artery
78
limb
60
blood
60
bodily fluid
46
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
86
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
86
AMP-T2D consortium
assay_slims!
DNA accessibility
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
86 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
tibial artery
1
23
coronary artery
1
5
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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