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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
33
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
33
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
RNA binding protein
Date released
58
February, 2021
23
October, 2019
4
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
87
bam
78
bigWig
58
tsv
24
bed narrowPeak
20
bigBed narrowPeak
6
tagAlign
Organism
91
Homo sapiens
Biosample type
58
cell line
31
tissue
2
primary cell
Organ
764
pancreas
704
liver
640
connective tissue
478
adipose tissue
393
epithelium
270
heart
246
brain
188
kidney
173
vasculature
170
blood vessel
147
bone element
91
artery
78
limb
61
musculature of body
50
blood
50
bodily fluid
40
nerve
37
embryo
28
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
91
AMP
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
91
AMP-T2D consortium
assay_slims!
DNA accessibility
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
91 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
coronary artery
1
4
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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