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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
2
WGBS
1
pCHi-C
Assay category
80
DNA binding
DNA accessibility
2
DNA methylation
Target of assay
57
transcription factor
14
control
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
34
December, 2018
25
January, 2019
23
November, 2018
1
March, 2020
Available data
82
bam
82
fastq
68
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
83
Homo sapiens
Biosample type
60
cell line
23
tissue
Organ
773
pancreas
762
liver
650
connective tissue
483
adipose tissue
401
epithelium
276
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
83
AMP
Genome assembly (visualization)
68
GRCh38
66
hg19
Lab
83
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
WGBS
pCHi-C
cell line
GM12878
60
tissue
spleen
20
2
1
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