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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
1
pCHi-C
Assay category
80
DNA binding
DNA accessibility
Target of assay
57
transcription factor
14
control
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
34
December, 2018
25
January, 2019
21
November, 2018
1
March, 2020
Available data
82
bam
82
fastq
68
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
81
Homo sapiens
Biosample type
60
cell line
21
tissue
Organ
767
pancreas
759
liver
647
connective tissue
481
adipose tissue
395
epithelium
308
heart
247
brain
187
kidney
176
vasculature
173
blood vessel
147
bone element
92
artery
77
limb
60
blood
60
bodily fluid
57
musculature of body
40
nerve
37
embryo
28
eye
21
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
81
AMP
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_slims!
DNA accessibility
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
pCHi-C
cell line
GM12878
60
tissue
spleen
20
1
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