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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
2
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
11
DNA binding
DNA accessibility
2
Transcription
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
11
June, 2019
2
February, 2023
1
July, 2019
1
March, 2020
Available data
11
bam
9
bed narrowPeak
9
bigBed narrowPeak
9
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
15
Homo sapiens
Biosample type
12
primary cell
2
in vitro differentiated cells
1
stem cell
Organ
84
bone element
70
epithelium
62
pancreas
22
kidney
15
connective tissue
8
musculature of body
6
embryo
5
heart
3
brain
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
total RNA-seq
RRBS
pCHi-C
primary cell
mesenchymal stem cell
7
cardiac fibroblast
4
1
in vitro differentiated cells
immature adipocyte
2
stem cell
mesenchymal stem cell
1
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