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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
35
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
35
DNA binding
Target of assay
21
histone
21
histone modification
14
broad histone mark
9
control
7
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
24
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
89
bam
80
bigWig
58
tsv
26
bed narrowPeak
21
bigBed narrowPeak
7
tagAlign
Organism
93
Homo sapiens
Biosample type
58
cell line
33
tissue
2
primary cell
Organ
773
pancreas
762
liver
650
connective tissue
483
adipose tissue
401
epithelium
276
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
93
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
93
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
93 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
coronary artery
1
5
pulmonary artery
2
pituitary gland
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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