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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
318
ChIP-seq
Assay category
318
DNA binding
Target of assay
244
transcription factor
88
histone
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
666
February, 2021
318
November, 2017
225
May, 2021
217
August, 2021
214
May, 2020
201
August, 2017
168
July, 2018
101
May, 2022
100
February, 2023
100
July, 2019
85
October, 2019
78
November, 2018
63
December, 2017
57
March, 2020
56
September, 2020
49
April, 2018
47
September, 2023
46
October, 2018
35
December, 2018
28
May, 2019
27
September, 2018
25
February, 2020
25
November, 2019
23
February, 2018
23
January, 2019
20
April, 2019
14
November, 2020
12
June, 2019
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
3
October, 2017
1
March, 2019
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
318
Homo sapiens
Biosample type
300
cell line
12
tissue
6
primary cell
Organ
300
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
318
AMP
Genome assembly (visualization)
257
hg19
207
GRCh38
Lab
318
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
assay_slims!
DNA accessibility
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
318 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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