Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
DNA accessibility
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2914
bam
2731
bigWig
1586
tsv
1237
bed narrowPeak
1174
fastq
720
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
157
AMP
Lab
94
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA accessibility
target.investigated_as!
recombinant protein
month_released!
May, 2023
BIOSAMPLE
ASSAY
157 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
+ See 2 more…
cell line
MIN6
1
See all biosamples
Download