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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
11
DNA accessibility
6
DNA methylation
Date released
701
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
187
June, 2019
168
July, 2018
159
May, 2022
106
August, 2017
96
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
11
November, 2018
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
102
fastq
99
bam
99
bigWig
89
tsv
10
bed narrowPeak
10
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
106
Homo sapiens
Biosample type
99
tissue
6
primary cell
1
in vitro differentiated cells
Organ
94
pancreas
4
musculature of body
3
epithelium
3
liver
2
connective tissue
1
adipose tissue
Project
106
AMP
Genome assembly (visualization)
103
hg19
96
GRCh38
Lab
106
AMP-T2D consortium
assay_slims!
DNA binding
assay_title!
WGBS
BIOSAMPLE
ASSAY
106 results
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Clear Filters
total RNA-seq
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
skeletal muscle tissue
4
right lobe of liver
1
1
liver
1
subcutaneous adipose tissue
1
primary cell
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
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