Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
DNA binding
94
Transcription
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Date released
92
August, 2021
36
February, 2023
30
June, 2019
15
July, 2019
8
February, 2021
5
March, 2020
1
October, 2019
Available data
96
tsv
77
bed narrowPeak
49
bam
41
bigWig
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
30
bigBed narrowPeak
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
187
Homo sapiens
Biosample type
175
tissue
8
cell line
4
primary cell
Organ
325
pancreas
264
epithelium
242
kidney
187
heart
97
bone element
73
vasculature
70
blood vessel
57
connective tissue
51
artery
51
brain
51
musculature of body
50
liver
49
limb
37
eye
20
adipose tissue
20
lung
18
ureter
12
skeleton
9
blood
9
bodily fluid
5
spleen
5
vein
3
nerve
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
187
AMP
Genome assembly (visualization)
84
GRCh38
45
hg19
Lab
187
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
187 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
DNase-seq
WGBS
Hi-C
pCHi-C
RRBS
small RNA-seq
tissue
coronary artery
36
2
heart left ventricle
18
2
3
4
1
1
1
heart
1
18
1
1
1
heart right ventricle
17
1
2
1
1
right cardiac atrium
18
1
1
+ See 9 more…
cell line
smooth muscle cell of the coronary artery
8
primary cell
cardiac fibroblast
3
1
See all biosamples
Download