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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
66
February, 2021
8
February, 2023
1
May, 2021
Available data
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
4
txt
Organism
75
Homo sapiens
Biosample type
74
tissue
1
primary cell
Organ
662
pancreas
523
connective tissue
417
adipose tissue
329
epithelium
295
kidney
257
heart
238
liver
133
vasculature
131
blood vessel
107
artery
75
bone element
67
brain
56
eye
56
musculature of body
55
limb
20
lung
18
ureter
16
skeleton
13
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
74
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
74
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_slims!
DNA binding
audit.ERROR.category!
inconsistent ontology term
assay_title!
DNAme array
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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