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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
DNA binding
44
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
32
June, 2019
10
October, 2019
6
February, 2021
5
July, 2019
3
February, 2020
Available data
49
bam
44
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
56
Homo sapiens
Biosample type
56
tissue
Organ
504
connective tissue
452
pancreas
416
adipose tissue
281
kidney
251
heart
229
liver
158
bone element
120
blood vessel
120
vasculature
105
artery
81
epithelium
56
brain
56
limb
54
eye
53
musculature of body
20
lung
18
ureter
16
skeleton
15
embryo
8
nerve
5
spleen
2
intestine
2
thymus
1
adrenal gland
1
blood
1
bodily fluid
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
56
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
56
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
primary cell
BIOSAMPLE
ASSAY
56 results
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DNase-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
tibial nerve
2
1
5
gastrocnemius medialis
1
4
tibial artery
2
1
1
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