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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
21
ATAC-seq
1
pCHi-C
Assay category
127
Transcription
DNA binding
21
DNA accessibility
Date released
659
February, 2021
273
August, 2021
163
June, 2019
149
May, 2021
144
May, 2020
120
July, 2018
117
February, 2023
109
August, 2017
73
July, 2019
66
May, 2022
58
October, 2019
51
March, 2020
47
September, 2023
46
November, 2019
25
February, 2020
19
April, 2020
17
November, 2018
15
February, 2018
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
8
October, 2017
6
April, 2018
5
December, 2019
5
January, 2019
4
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
126
bigWig
121
bam
121
tsv
Organism
149
Homo sapiens
Biosample type
89
in vitro differentiated cells
primary cell
40
tissue
20
cell line
Organ
57
pancreas
22
epithelium
3
heart
2
embryo
1
connective tissue
1
thymus
Project
148
AMP
1
T1D
Genome assembly (visualization)
126
hg19
121
GRCh38
Lab
137
AMP-T2D consortium
12
Kyle Gaulton, UCSD
Audit category:
85
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
primary cell
assay_title!
Hi-C
BIOSAMPLE
ASSAY
149 results
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total RNA-seq
ATAC-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
embryonic stem cell
5
5
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
cell line
EndoC_BH1
4
16
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